Download FASTA, GFF, VCF, gene ontology files of ant genome data.
Assembled from raw RNA reads and may contain non-coding and non-ant sequences. From Morandin et al (in press).
Assembled from raw RNA reads and may contain non-coding and non-ant sequences. From Morandin et al (in press).
Assembled from raw RNA reads and may contain non-coding and non-ant sequences. From Morandin et al (in press).
The contigs that were used for scaffolding (more than 99% of sequence information found here is also in scaffolds file).
Assembled from raw RNA reads and may contain non-coding and non-ant sequences. From Morandin et al (in press).
Assembled from raw RNA reads and may contain non-coding and non-ant sequences. From Morandin et al (in press).
Assembled from raw RNA reads and may contain non-coding and non-ant sequences. From Morandin et al (in press).
Assembled from raw RNA reads and may contain non-coding and non-ant sequences. From Morandin et al (in press).
Assembled from raw RNA reads and may contain non-coding and non-ant sequences. From Morandin et al (in press).
Assembled from raw RNA reads and may contain non-coding and non-ant sequences. From Morandin et al (in press).
Assembled from raw RNA reads and may contain non-coding and non-ant sequences. From Morandin et al (in press).
Assembled from raw RNA reads and may contain non-coding and non-ant sequences. From Morandin et al (in press).
Assembled from raw RNA reads and may contain non-coding and non-ant sequences. From Morandin et al (in press).
Assembled from raw RNA reads and may contain non-coding and non-ant sequences. From Morandin et al (in press).
Assembled from raw RNA reads and may contain non-coding and non-ant sequences. From Morandin et al (in press).
Assembled from raw RNA reads and may contain non-coding and non-ant sequences. From Morandin et al (in press).
Assembled from raw RNA reads and may contain non-coding and non-ant sequences. From Morandin et al (in press).
Assembled from raw RNA reads and may contain non-coding and non-ant sequences. From Morandin et al (in press).
These include gene coordinates (in a GFF file) and functional annotations (in tab separated txt file). If you don't think you need these, you probably don't.
GFF files that also contain coordinates of EST and homology annotation (to facilitate manual inspection in Apollo) are not publicly available ...
The following are fasta files of genome scaffolds. This is probably what you want. Each scaffold is a set of one or more contigs joined by sequences of Ns that represent gaps.
The contigs that were used for scaffolding (more than 99% of sequence information found here is also in scaffolds file).
Also known as "OGS": Official Gene Sets.
Paired end Roche 454 reads: 20,000bp insert library.
Paired end Roche 454 reads: 8,000bp insert library.
Roche 454 Shotgun data (single-end reads).
Roche 454 reads are also available at Sequence Read Archive for downloads as FASTA and FASTQ (some of these are paired).
2*330bp insert Illumina reads of different lengths available at Sequence Read Archive.
These include SNP annotations, typically in a VCF file.
These include predicted coding sequence corresponding to the official protein sets above as well as RNA/EST sequences obtained by sequencing and assembly.
CDS predictions corresponding to predicted proteins can also be generated from genome + GFF.
Assembled from raw RNA reads and may contain non-coding and non-ant sequences. From Morandin et al (in press).
Assembled from raw RNA reads and may contain non-coding and non-ant sequences. From Morandin et al (in press).
Assembled from raw RNA reads and may contain non-coding and non-ant sequences. From Morandin et al (in press).
Assembled from raw RNA reads and may contain non-coding and non-ant sequences. From Morandin et al (in press).
Assembled from raw RNA reads and may contain non-coding and non-ant sequences. From Morandin et al (in press).
Assembled from raw RNA reads and may contain non-coding and non-ant sequences. From Morandin et al (in press).
Assembled from raw RNA reads and may contain non-coding and non-ant sequences. From Morandin et al (in press).
Assembled from raw RNA reads and may contain non-coding and non-ant sequences. From Morandin et al (in press).
Assembled from raw RNA reads and may contain non-coding and non-ant sequences. From Morandin et al (in press).
Assembled from raw RNA reads and may contain non-coding and non-ant sequences. From Morandin et al (in press).
Assembled from raw RNA reads and may contain non-coding and non-ant sequences. From Morandin et al (in press).
Assembled from raw RNA reads and may contain non-coding and non-ant sequences. From Morandin et al (in press).
Assembled from raw RNA reads and may contain non-coding and non-ant sequences. From Morandin et al (in press).
Assembled from raw RNA reads and may contain non-coding and non-ant sequences. From Morandin et al (in press).
Assembled from raw RNA reads and may contain non-coding and non-ant sequences. From Morandin et al (in press).
Assembled from raw RNA reads and may contain non-coding and non-ant sequences. From Morandin et al (in press).
Assembled from raw RNA reads and may contain non-coding and non-ant sequences. From Morandin et al (in press).